PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_010848-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 182aa    MW: 20348.1 Da    PI: 6.1686
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_010848-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000133052123
                   EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                   y+C  C++ F++   L  H++ H
  NNU_010848-RA 30 YRCVFCKRGFTTAQALGGHMNIH 52
                   9********************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.2E-42056IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.1E-62857No hitNo description
PROSITE profilePS5015711.3443057IPR007087Zinc finger, C2H2
PROSITE patternPS0002803252IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MESSHEDSKT SSEDGDQQDH QDDASTGRSY RCVFCKRGFT TAQALGGHMN IHRKERARIR  60
QPAAPSVSNK PDGKEVCPEF PPPSSSRRPL YPPTPDAQRS YHVYFPPSSS SSSAGTRHPQ  120
GHHAGDEFYI RKPQSSSLFE DDCNTNLCLQ IGPVHTNYGE EEKKREAEEV EPDLELRLGH  180
DP
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262253.11e-133PREDICTED: transcriptional regulator SUPERMAN-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-14C2H2 family protein